The MII PR Patho Additional Specified Grouper profile of the Observation resource represents the respective observation report section "Additional Specified Observations" (corresponding to this CDA section) as a DiagnosticReport.result for an MII PR Patho Report and acts as an organizer for the corresponding groupings of MII PR Patho Findings from non-morphological or molecular genetic studies.
This special grouper observation element must be placed before all other observation elements, which are then included as hasMember or derivedFrom references to MII PR Patho Finding.
If this observation report section contains multiple input specimens, only one MII PR Patho Additional Specified Grouper should be used.
For a list and explanation of the FHIR elements, see (abstract) MII PR Patho Section Grouper.
| Name | Canonical |
|---|---|
| MII_PR_Patho_Additional_Specified_Grouper | https://www.medizininformatik-initiative.de/fhir/ext/modul-patho/StructureDefinition/mii-pr-patho-additional-specified-grouper |
| MII_PR_Patho_Additional_Specified_Grouper (Observation) | C | MII_PR_Patho_Section_Grouper | |
| id | S Σ | 0..1 | string |
| meta | Σ | 0..1 | Meta |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| versionId | Σ | 0..1 | id |
| lastUpdated | S Σ | 0..1 | instant |
| source | Σ | 0..1 | uri |
| profile | S Σ | 0..* | canonical(StructureDefinition) |
| security | Σ | 0..* | CodingBinding |
| tag | Σ | 0..* | Coding |
| implicitRules | Σ ?! | 0..1 | uri |
| language | 0..1 | codeBinding | |
| text | S | 0..1 | Narrative |
| contained | 0..* | Resource | |
| extension | C | 0..* | Extension |
| modifierExtension | ?! C | 0..* | Extension |
| identifier | S Σ | 0..* | Identifier |
| basedOn | S Σ C | 0..* | Reference(ServiceRequest) |
| partOf | Σ C | 0..* | Reference(ImagingStudy | Immunization | MedicationAdministration | MedicationDispense | MedicationStatement | Procedure) |
| status | S Σ ?! | 1..1 | codeBinding |
| category | S | 1..* | CodeableConceptBinding |
| (All Slices) | |||
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | Coding |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uri |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| laboratory-category | S | 1..1 | CodeableConceptBindingPattern |
| code | S Σ | 1..1 | CodeableConceptPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | codePattern |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| subject | S Σ C | 0..1 | Reference(Patient) |
| focus | Σ C | 0..* | Reference(Resource) |
| encounter | Σ C | 0..1 | Reference(Encounter) |
| effective[x] | S Σ | 0..1 | |
| effectiveDateTime | dateTime | ||
| issued | Σ | 0..1 | instant |
| performer | Σ C | 0..* | Reference(CareTeam | Organization | Patient | Practitioner | PractitionerRole | RelatedPerson) |
| value[x] | Σ C | 0..1 | |
| valueBoolean | boolean | ||
| valueCodeableConcept | CodeableConcept | ||
| valueDateTime | dateTime | ||
| valueInteger | integer | ||
| valuePeriod | Period | ||
| valueQuantity | Quantity | ||
| valueRange | Range | ||
| valueRatio | Ratio | ||
| valueSampledData | SampledData | ||
| valueString | string | ||
| valueTime | time | ||
| dataAbsentReason | C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| note | 0..* | Annotation | |
| bodySite | S | 0..1 | CodeableConcept |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | Σ | 0..* | Coding |
| sct | S Σ | 0..1 | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | Σ | 0..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| method | S | 0..1 | CodeableConcept |
| specimen | S C | 0..1 | Reference(Specimen) |
| device | C | 0..1 | Reference(Device | DeviceMetric) |
| referenceRange | C | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| low | C | 0..1 | SimpleQuantity |
| high | C | 0..1 | SimpleQuantity |
| type | 0..1 | CodeableConceptBinding | |
| appliesTo | 0..* | CodeableConcept | |
| age | C | 0..1 | Range |
| text | 0..1 | string | |
| hasMember | S Σ C | 0..* | Reference(MolecularSequence | Observation | QuestionnaireResponse) |
| pathology-finding | S Σ C | 0..* | Reference(MII_PR_Patho_Finding) |
| derivedFrom | S Σ C | 0..* | Reference(DocumentReference | ImagingStudy | Media | MolecularSequence | Observation | QuestionnaireResponse) |
| attached-image | S Σ C | 0..* | Reference(MII_PR_Patho_Attached_Image) |
| dicom-image | S Σ C | 0..* | Reference(ImagingStudy) |
| component | Σ | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| code | S Σ | 1..1 | CodeableConcept |
| value[x] | Σ | 0..1 | |
| valueCodeableConcept | CodeableConcept | ||
| valueQuantity | Quantity | ||
| valueRatio | Ratio | ||
| valueString | string | ||
| dataAbsentReason | S C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| referenceRange | 0..* | see (referenceRange) |
| MII_PR_Patho_Additional_Specified_Grouper (Observation) | C | MII_PR_Patho_Section_Grouper | |
| id | S Σ | 0..1 | string |
| meta | Σ | 0..1 | Meta |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| versionId | Σ | 0..1 | id |
| lastUpdated | S Σ | 0..1 | instant |
| source | Σ | 0..1 | uri |
| profile | S Σ | 0..* | canonical(StructureDefinition) |
| security | Σ | 0..* | CodingBinding |
| tag | Σ | 0..* | Coding |
| implicitRules | Σ ?! | 0..1 | uri |
| language | 0..1 | codeBinding | |
| text | S | 0..1 | Narrative |
| contained | 0..* | Resource | |
| extension | C | 0..* | Extension |
| modifierExtension | ?! C | 0..* | Extension |
| identifier | S Σ | 0..* | Identifier |
| basedOn | S Σ C | 0..* | Reference(ServiceRequest) |
| partOf | Σ C | 0..* | Reference(ImagingStudy | Immunization | MedicationAdministration | MedicationDispense | MedicationStatement | Procedure) |
| status | S Σ ?! | 1..1 | codeBinding |
| category | S | 1..* | CodeableConceptBinding |
| (All Slices) | |||
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | Coding |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uri |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| laboratory-category | S | 1..1 | CodeableConceptBindingPattern |
| code | S Σ | 1..1 | CodeableConceptPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | codePattern |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| subject | S Σ C | 0..1 | Reference(Patient) |
| focus | Σ C | 0..* | Reference(Resource) |
| encounter | Σ C | 0..1 | Reference(Encounter) |
| effective[x] | S Σ | 0..1 | |
| effectiveDateTime | dateTime | ||
| issued | Σ | 0..1 | instant |
| performer | Σ C | 0..* | Reference(CareTeam | Organization | Patient | Practitioner | PractitionerRole | RelatedPerson) |
| value[x] | Σ C | 0..1 | |
| valueBoolean | boolean | ||
| valueCodeableConcept | CodeableConcept | ||
| valueDateTime | dateTime | ||
| valueInteger | integer | ||
| valuePeriod | Period | ||
| valueQuantity | Quantity | ||
| valueRange | Range | ||
| valueRatio | Ratio | ||
| valueSampledData | SampledData | ||
| valueString | string | ||
| valueTime | time | ||
| dataAbsentReason | C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| note | 0..* | Annotation | |
| bodySite | S | 0..1 | CodeableConcept |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | Σ | 0..* | Coding |
| sct | S Σ | 0..1 | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | Σ | 0..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| method | S | 0..1 | CodeableConcept |
| specimen | S C | 0..1 | Reference(Specimen) |
| device | C | 0..1 | Reference(Device | DeviceMetric) |
| referenceRange | C | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| low | C | 0..1 | SimpleQuantity |
| high | C | 0..1 | SimpleQuantity |
| type | 0..1 | CodeableConceptBinding | |
| appliesTo | 0..* | CodeableConcept | |
| age | C | 0..1 | Range |
| text | 0..1 | string | |
| hasMember | S Σ C | 0..* | Reference(MolecularSequence | Observation | QuestionnaireResponse) |
| pathology-finding | S Σ C | 0..* | Reference(MII_PR_Patho_Finding) |
| derivedFrom | S Σ C | 0..* | Reference(DocumentReference | ImagingStudy | Media | MolecularSequence | Observation | QuestionnaireResponse) |
| attached-image | S Σ C | 0..* | Reference(MII_PR_Patho_Attached_Image) |
| dicom-image | S Σ C | 0..* | Reference(ImagingStudy) |
| component | Σ | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| code | S Σ | 1..1 | CodeableConcept |
| value[x] | Σ | 0..1 | |
| valueCodeableConcept | CodeableConcept | ||
| valueQuantity | Quantity | ||
| valueRatio | Ratio | ||
| valueString | string | ||
| dataAbsentReason | S C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| referenceRange | 0..* | see (referenceRange) |
| MII_PR_Patho_Additional_Specified_Grouper (Observation) | C | MII_PR_Patho_Section_Grouper | |
| id | S Σ | 0..1 | string |
| meta | Σ | 0..1 | Meta |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| versionId | Σ | 0..1 | id |
| lastUpdated | S Σ | 0..1 | instant |
| source | Σ | 0..1 | uri |
| profile | S Σ | 0..* | canonical(StructureDefinition) |
| security | Σ | 0..* | CodingBinding |
| tag | Σ | 0..* | Coding |
| implicitRules | Σ ?! | 0..1 | uri |
| language | 0..1 | codeBinding | |
| text | S | 0..1 | Narrative |
| contained | 0..* | Resource | |
| extension | C | 0..* | Extension |
| modifierExtension | ?! C | 0..* | Extension |
| identifier | S Σ | 0..* | Identifier |
| basedOn | S Σ C | 0..* | Reference(ServiceRequest) |
| partOf | Σ C | 0..* | Reference(ImagingStudy | Immunization | MedicationAdministration | MedicationDispense | MedicationStatement | Procedure) |
| status | S Σ ?! | 1..1 | codeBinding |
| category | S | 1..* | CodeableConceptBinding |
| (All Slices) | |||
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | Coding |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uri |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| laboratory-category | S | 1..1 | CodeableConceptBindingPattern |
| code | S Σ | 1..1 | CodeableConceptPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | S Σ | 1..* | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | S Σ | 1..1 | codePattern |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| subject | S Σ C | 0..1 | Reference(Patient) |
| focus | Σ C | 0..* | Reference(Resource) |
| encounter | Σ C | 0..1 | Reference(Encounter) |
| effective[x] | S Σ | 0..1 | |
| effectiveDateTime | dateTime | ||
| issued | Σ | 0..1 | instant |
| performer | Σ C | 0..* | Reference(CareTeam | Organization | Patient | Practitioner | PractitionerRole | RelatedPerson) |
| value[x] | Σ C | 0..1 | |
| valueBoolean | boolean | ||
| valueCodeableConcept | CodeableConcept | ||
| valueDateTime | dateTime | ||
| valueInteger | integer | ||
| valuePeriod | Period | ||
| valueQuantity | Quantity | ||
| valueRange | Range | ||
| valueRatio | Ratio | ||
| valueSampledData | SampledData | ||
| valueString | string | ||
| valueTime | time | ||
| dataAbsentReason | C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| note | 0..* | Annotation | |
| bodySite | S | 0..1 | CodeableConcept |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| coding | Σ | 0..* | Coding |
| sct | S Σ | 0..1 | CodingBindingPattern |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| system | S Σ | 1..1 | uriPattern |
| version | Σ | 0..1 | string |
| code | Σ | 0..1 | code |
| display | Σ | 0..1 | string |
| userSelected | Σ | 0..1 | boolean |
| text | Σ | 0..1 | string |
| method | S | 0..1 | CodeableConcept |
| specimen | S C | 0..1 | Reference(Specimen) |
| device | C | 0..1 | Reference(Device | DeviceMetric) |
| referenceRange | C | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| low | C | 0..1 | SimpleQuantity |
| high | C | 0..1 | SimpleQuantity |
| type | 0..1 | CodeableConceptBinding | |
| appliesTo | 0..* | CodeableConcept | |
| age | C | 0..1 | Range |
| text | 0..1 | string | |
| hasMember | S Σ C | 0..* | Reference(MolecularSequence | Observation | QuestionnaireResponse) |
| pathology-finding | S Σ C | 0..* | Reference(MII_PR_Patho_Finding) |
| derivedFrom | S Σ C | 0..* | Reference(DocumentReference | ImagingStudy | Media | MolecularSequence | Observation | QuestionnaireResponse) |
| attached-image | S Σ C | 0..* | Reference(MII_PR_Patho_Attached_Image) |
| dicom-image | S Σ C | 0..* | Reference(ImagingStudy) |
| component | Σ | 0..* | BackboneElement |
| id | 0..1 | string | |
| extension | C | 0..* | Extension |
| modifierExtension | Σ ?! C | 0..* | Extension |
| code | S Σ | 1..1 | CodeableConcept |
| value[x] | Σ | 0..1 | |
| valueCodeableConcept | CodeableConcept | ||
| valueQuantity | Quantity | ||
| valueRatio | Ratio | ||
| valueString | string | ||
| dataAbsentReason | S C | 0..1 | CodeableConceptBinding |
| interpretation | 0..* | CodeableConceptBinding | |
| referenceRange | 0..* | see (referenceRange) |
The following search parameters are relevant for the Pathology Findings module, also in combination:
_id MUST be supported:Examples:
GET [base]/Observation?_id=103270
Usage Notes: Further information on searching for _id can be found in the FHIR Base Specification - Section "Parameters for all resources".
Examples:
GET [base]/Observation?_lastUpdated=2021-12-08
Usage Notes: Further information on searching for _lastUpdated can be found in the FHIR Base Specification - Section "Parameters for all resources".
_profile MUST be supported:Examples:
GET [base]/Observation?_profile=https://www.medizininformatik-initiative.de/fhir/ext/modul-patho/StructureDefinition/mii-pr-patho-report
Usage Notes: Further information on searching for ```_profile`` can be found in the FHIR Base Specification - Section "Parameters for all resources".
based-on MUST be supported:Examples:
GET [base]/Observation?based-on=ServiceRequest/124455
Usage Notes: For more information on searching for ```Observation.basedOn``, see the FHIR Base Specification - "reference" section.
category MUST be supported:Examples:
GET [base]/Observation?category=http://terminology.hl7.org/CodeSystem/observation-category|laboratory
GET [base]/Observation?category=laboratory
Usage Notes: For more information on searching for ```Observation.category``, see the FHIR Base Specification - "token" section.
code MUST be supported:Examples:
GET [base]/Observation?code=http://loinc.org|100969-5
````GET [base]/Observation?code=100969-5```
Usage Notes: For more information on searching for ```Observation.code``, see the FHIR Base Specification - "token" section.
data-absent-reason MUST be supported:Examples:
GET [base]/Observation?data-absent-reason=http://hl7.org/fhir/codesystem-data-absent-reason.html|unknown
GET [base]/Observation?data-absent-reason=unknown
Usage notes: Further information on searching for Observation.data-absent-reason can be found in the FHIR Base Specification - "token" section.
Examples:
GET [base]/Observation?date=2021-06-01
Usage Notes: For more information on searching for ```Observation.date``, see the FHIR Base Specification - "date" section.
Examples:
``GET [base]/Observation?encounter=Encounter/769808```
Usage Notes: Further information on searching for ```Observation.encounter`` can be found in the FHIR Base Specification - Reference Section.
Examples:
GET [base]/Observation?has-member=Observation/ex-mii-patho-biopsy-site-a
Usage Notes: Further information on searching for ```Observation.hasMember`` can be found in the FHIR Base Specification - Reference Section.
Examples:
GET [base]/Observation?identifier=https://pathologie.klinikum-karlsruhe.de/fhir/fn/befundbericht|12345
GET [base]/Observation?identifier=12345
Usage Notes: Further information on searching for "Observation.identifier" can be found in the FHIR Base Specification - "token" section.
Examples:
``GET [base]/Observation?patient=Patient/12345```
Usage Notes: Further information on searching for Observation.subject.where(resolve() is Patient) can be found in the FHIR Base Specification - Reference Section.
Examples:
GET [base]/Observation?performer=Practitioner/2346545
Usage Notes: Further information on searching for ```Observation.performer`` can be found in the FHIR Base Specification - Reference Section.
Examples:
``GET [base]/DiagnosticReport?specimen=Specimen/987976```
Usage Notes: Further information on searching for ```Observation.specimen`` can be found in the FHIR Base Specification - "reference" section.
Examples:
GET [base]/Observation?status=final
Usage Notes: Further information on searching for ```Observation.status`` can be found in the FHIR Base Specification - "token" section.
Examples:
``GET [base]/Observation?subject=Patient/12345```
Usage Notes: Further information on searching for ```Observation.subject`` can be found in the FHIR Base Specification - "reference" section.
Examples:
GET [base]/Observation?value-string:contains=Macroscopy
Usage Notes: Further information on searching for ```Observation.value`` can be found in the FHIR Base Specification - "string" section.
body-site MUST be supported:Examples:
GET [base]/Observation?body-site=716917000
````GET [base]/Observation?body-site=http://snomed.info/sct|716917000```
Usage Notes: For more information on searching for ```Observation.bodySite``, see the FHIR Base Specification - "token" section.